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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015880202.1_cds_XP_016437417.1_33180
CDS Infomation

[gene=LOC107763446] [db_xref=GeneID:107763446] [protein=omega-3 fatty acid desaturase, endoplasmic reticulum] [protein_id=XP_016437417.1] [location=complement(join(685..873,954..1091,1176..1256,1324..1509,1585..1677,1753..1819,1901..1990,2112..2407))] [gbkey=CDS]
Sequence

ATGGGGTCTCTGGGAATAAGTGAGATTTATGATAAGAACAGCTTTAACGAGATGGAGTTT
GAATTCGACCCGAGTGCCCCTCCTCCGTTTAGGCTGGCTGAGATACGAAATGTCATCCCT
AAGCATTGCTGGGTTAAAGATCCACTTAGGTCCTTGAGCTATGTTGTGAGGGACGTAATA
TTTGTTGCTACCTTGATTGGCATAGCAATTCACTTGGATAGTTGGTTATTTTACCCACTT
TACTGGGCTATCCAAGGCACCATGTTTTGGGCAATCTTTGTTCTTGGACATGATTGTGGC
CATGGCAGCTTTTCAGACAGCCAGTTGCTAAATAATGTGGTTGGTCACATACTTCATTCT
GCCATTCTGGTACCCTACCATGGCTGGAGAATCAGCCATAAAACTCACCATCAGAACCAT
GGAAATGTGGAGACTGATGAGTCTTGGGTGCCGATGCCTGAAAAGCTATACAACAAAGTG
GGCTATTCAACCAAGTTCCTAAGATACAAGATCCCTTTTCCCTTGTTAGCATATCCAATG
TACCTGATGAAGAGAAGTCCAGGAAAATCTGGTTCTCATTTCAACCCATATAGTGATTTG
TTCCAACCCCATGAGAGGAAGTATGTGGTAACATCAACTCTGTGCTGGACTGTCATGGCA
GCTCTCCTCCTCTATCTCTGCACTGCCTTTGGTTCTCTCCAAATGTTTAAGATTTATGGC
GCTCCTTACTTGATTTTTGTAATGTGGCTGGATTTTGTTACCTACTTGCATCACCATGGT
TATGAGAAGAAGCTTCCCTGGTACCGCGGCAAGGAATGGAGTTATCTTAGAGGAGGACTA
ACCACAGTTGATAGAGACTACGGATTGTTTAACAACATACATCATGACATTGGAACACAT
GTTATCCACCATCTATTTCCTCAGATACCACATTATCACTTGAGAGAAGCGACCAAAGCA
GCAAAGCCAGTACTTGGCAAGTATTACAGGGAACCCAAGAAATCAGGGCCAATTCCTTTT
CACTTGGTTAAGGATTTAACAAGGAGCATGAAGCAGGATCATTATGTTAGCGATTCCGGG
GAGATTGTTTTCTATCAGACCGATCCACACATCTTCCGATCTGCTCCAAAGGATGAATGA

Peptide Sequence

PEP ID

XP_016437417.1
PEP Infomation

PREDICTED: omega-3 fatty acid desaturase, endoplasmic reticulum [Nicotiana tabacum]
Sequence

MGSLGISEIYDKNSFNEMEFEFDPSAPPPFRLAEIRNVIPKHCWVKDPLRSLSYVVRDVI
FVATLIGIAIHLDSWLFYPLYWAIQGTMFWAIFVLGHDCGHGSFSDSQLLNNVVGHILHS
AILVPYHGWRISHKTHHQNHGNVETDESWVPMPEKLYNKVGYSTKFLRYKIPFPLLAYPM
YLMKRSPGKSGSHFNPYSDLFQPHERKYVVTSTLCWTVMAALLLYLCTAFGSLQMFKIYG
APYLIFVMWLDFVTYLHHHGYEKKLPWYRGKEWSYLRGGLTTVDRDYGLFNNIHHDIGTH
VIHHLFPQIPHYHLREATKAAKPVLGKYYREPKKSGPIPFHLVKDLTRSMKQDHYVSDSG
EIVFYQTDPHIFRSAPKDE

Transcript Sequence

Gene sequence data has not been registered.